Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-548h in IDC Breast Radvanyi Cluster 63 Table contains all genes in the IDC Breast Radvanyi cluster number 63. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548h 51385 ZNF589 zinc finger protein 589 [Source:HGNC Symbol;Acc:16747] zzz999 63982 ANO3 anoctamin 3 [Source:HGNC Symbol;Acc:14004] zzz999 112399 EGLN3 egl nine homolog 3 (C. elegans) [Source:HGNC Symbol;Acc:14661] zzz999 128434 VSTM2L V-set and transmembrane domain containing 2 like [Source:HGNC Symbol;Acc:16096] zzz999 3422 IDI1 isopentenyl-diphosphate delta isomerase 1 [Source:HGNC Symbol;Acc:5387] T 23316 CUX2 cut-like homeobox 2 [Source:HGNC Symbol;Acc:19347] zzz999 9076 CLDN1 claudin 1 [Source:HGNC Symbol;Acc:2032] zzz999 65260 SELRC1 Sel1 repeat containing 1 [Source:HGNC Symbol;Acc:25716] zzz999 2678 GGT1 gamma-glutamyltransferase 1 [Source:HGNC Symbol;Acc:4250] zzz999 150696 PROM2 prominin 2 [Source:HGNC Symbol;Acc:20685] zzz999 2104 ESRRG estrogen-related receptor gamma [Source:HGNC Symbol;Acc:3474] zzz999 116372 LYPD1 LY6/PLAUR domain containing 1 [Source:HGNC Symbol;Acc:28431] zzz999 8942 KYNU kynureninase [Source:HGNC Symbol;Acc:6469] zzz999 1496 CTNNA2 catenin (cadherin-associated protein), alpha 2 [Source:HGNC Symbol;Acc:2510] zzz999 200958 MUC20 mucin 20, cell surface associated [Source:HGNC Symbol;Acc:23282] zzz999 2243 FGA fibrinogen alpha chain [Source:HGNC Symbol;Acc:3661] T 65985 AACS acetoacetyl-CoA synthetase [Source:HGNC Symbol;Acc:21298] zzz999 5437 POLR2H polymerase (RNA) II (DNA directed) polypeptide H [Source:HGNC Symbol;Acc:9195] P 221830 TWISTNB TWIST neighbor [Source:HGNC Symbol;Acc:18027] zzz999 51090 PLLP plasmolipin [Source:HGNC Symbol;Acc:18553] zzz999 80168 MOGAT2 monoacylglycerol O-acyltransferase 2 [Source:HGNC Symbol;Acc:23248] zzz999 1644 DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) [Source:HGNC Symbol;Acc:2719] zzz999 1272 CNTN1 contactin 1 [Source:HGNC Symbol;Acc:2171] zzz999 55105 GPATCH2 G patch domain containing 2 [Source:HGNC Symbol;Acc:25499] zzz999 11264 PXMP4 peroxisomal membrane protein 4, 24kDa [Source:HGNC Symbol;Acc:15920] zzz999 875 CBS cystathionine-beta-synthase [Source:HGNC Symbol;Acc:1550] zzz999 30001 ERO1L ERO1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:13280] T 9173 IL1RL1 interleukin 1 receptor-like 1 [Source:HGNC Symbol;Acc:5998] zzz999 79650 C16orf57 chromosome 16 open reading frame 57 [Source:HGNC Symbol;Acc:25792] zzz999 57002 C7orf36 chromosome 7 open reading frame 36 [Source:HGNC Symbol;Acc:24857] zzz999 120103 SLC36A4 solute carrier family 36 (proton/amino acid symporter), member 4 [Source:HGNC Symbol;Acc:19660] zzz999 10162 LPCAT3 lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:30244] zzz999 28983 TMPRSS11E transmembrane protease, serine 11E [Source:HGNC Symbol;Acc:24465] zzz999 7097 TLR2 toll-like receptor 2 [Source:HGNC Symbol;Acc:11848] zzz999 10954 PDIA5 protein disulfide isomerase family A, member 5 [Source:HGNC Symbol;Acc:24811] zzz999 1510 CTSE cathepsin E [Source:HGNC Symbol;Acc:2530] zzz999 53836 GPR87 G protein-coupled receptor 87 [Source:HGNC Symbol;Acc:4538] zzz999 121506 ERP27 endoplasmic reticulum protein 27 [Source:HGNC Symbol;Acc:26495] zzz999 55885 LMO3 LIM domain only 3 (rhombotin-like 2) [Source:HGNC Symbol;Acc:6643] P 163071 ZNF114 zinc finger protein 114 [Source:HGNC Symbol;Acc:12894] zzz999 247 ALOX15B arachidonate 15-lipoxygenase, type B [Source:HGNC Symbol;Acc:434] zzz999 5318 PKP2 plakophilin 2 [Source:HGNC Symbol;Acc:9024] zzz999 9073 CLDN8 claudin 8 [Source:HGNC Symbol;Acc:2050] T 5194 PEX13 peroxisomal biogenesis factor 13 [Source:HGNC Symbol;Acc:8855] T 10344 CCL26 chemokine (C-C motif) ligand 26 [Source:HGNC Symbol;Acc:10625] zzz999 51806 CALML5 calmodulin-like 5 [Source:HGNC Symbol;Acc:18180] zzz999 90637 ZFAND2A zinc finger, AN1-type domain 2A [Source:HGNC Symbol;Acc:28073] zzz999 59272 ACE2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 [Source:HGNC Symbol;Acc:13557] zzz999 51166 AADAT aminoadipate aminotransferase [Source:HGNC Symbol;Acc:17929] T 55255 WDR41 WD repeat domain 41 [Source:HGNC Symbol;Acc:25601] zzz999 92291 CAPN13 calpain 13 [Source:HGNC Symbol;Acc:16663] zzz999 51228 GLTP glycolipid transfer protein [Source:HGNC Symbol;Acc:24867] zzz999 8916 HERC3 hect domain and RLD 3 [Source:HGNC Symbol;Acc:4876] zzz999 5028 P2RY1 purinergic receptor P2Y, G-protein coupled, 1 [Source:HGNC Symbol;Acc:8539] T 389668 XKR9 XK, Kell blood group complex subunit-related family, member 9 [Source:HGNC Symbol;Acc:20937] zzz999 221416 C6orf223 chromosome 6 open reading frame 223 [Source:HGNC Symbol;Acc:28692] zzz999 63923 TNN tenascin N [Source:HGNC Symbol;Acc:22942] zzz999 2051 EPHB6 EPH receptor B6 [Source:HGNC Symbol;Acc:3396] zzz999 83886 PRSS27 protease, serine 27 [Source:HGNC Symbol;Acc:15475] zzz999 3694 ITGB6 integrin, beta 6 [Source:HGNC Symbol;Acc:6161] T 116285 ACSM1 acyl-CoA synthetase medium-chain family member 1 [Source:HGNC Symbol;Acc:18049] zzz999 2965 GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa [Source:HGNC Symbol;Acc:4655] T 2020 EN2 engrailed homeobox 2 [Source:HGNC Symbol;Acc:3343] zzz999 2796 GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) [Source:HGNC Symbol;Acc:4419] zzz999 10538 BATF basic leucine zipper transcription factor, ATF-like [Source:HGNC Symbol;Acc:958] zzz999 23562 CLDN14 claudin 14 [Source:HGNC Symbol;Acc:2035] zzz999 54957 TXNL4B thioredoxin-like 4B [Source:HGNC Symbol;Acc:26041] zzz999 9118 INA internexin neuronal intermediate filament protein, alpha [Source:HGNC Symbol;Acc:6057] P T 2329 FMO4 flavin containing monooxygenase 4 [Source:HGNC Symbol;Acc:3772] zzz999 283635 FAM177A1 family with sequence similarity 177, member A1 [Source:HGNC Symbol;Acc:19829] zzz999 6715 SRD5A1 steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) [Source:HGNC Symbol;Acc:11284] zzz999 3050 HBZ hemoglobin, zeta [Source:HGNC Symbol;Acc:4835] zzz999 27297 CRCP CGRP receptor component [Source:HGNC Symbol;Acc:17888] zzz999 1030 CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) [Source:HGNC Symbol;Acc:1788] zzz999 79623 GALNT14 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:HGNC Symbol;Acc:22946] zzz999 727 C5 complement component 5 [Source:HGNC Symbol;Acc:1331] zzz999 8365 HIST2H4B histone cluster 2, H4b [Source:HGNC Symbol;Acc:29607] zzz999 9503 XAGE1E X antigen family, member 1E [Source:HGNC Symbol;Acc:18372] zzz999 8000 PSCA prostate stem cell antigen [Source:HGNC Symbol;Acc:9500] zzz999

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.